Gluten-Free Vegan Pumpkin Muffins with Sunflower Seeds

These gluten-free vegan pumpkin muffins are soft, fluffy, and full of cozy fall flavors.

The pumpkin keeps them moist, the spices make them warm and fragrant, and the sunflower seeds give a perfect little crunch.

They’re the kind of muffins you’ll want with your morning coffee or for a snack in the afternoon.

What You’ll Need

  • 1 3/4 cups gluten-free all-purpose flour
  • 1 cup canned pumpkin puree (unsweetened)
  • 3/4 cup coconut sugar
  • 1/3 cup melted coconut oil
  • 1/2 cup unsweetened almond milk
  • 2 teaspoons baking powder
  • 1/2 teaspoon baking soda
  • 1 teaspoon ground cinnamon
  • 1/2 teaspoon ground nutmeg
  • 1/4 teaspoon ground ginger
  • 1/2 teaspoon salt
  • 1 teaspoon vanilla extract
  • 3 tablespoons sunflower seeds (plus extra for topping)

Ingredient + Tools

Why I Love This Recipe

I first made these muffins on a chilly autumn morning when I wanted something warm and comforting without a ton of effort. The smell that filled the kitchen was pure fall happiness.

  • Perfectly moist without feeling heavy
  • Naturally sweetened with coconut sugar
  • Gluten-free and vegan without sacrificing taste
  • A little crunch from sunflower seeds for texture
Gluten-Free Vegan Pumpkin Muffins with Sunflower Seeds

How Many Servings + Time

Makes: 12 muffins
Cook Time: 25 minutes (plus 10 minutes cooling)

Macros (Per Muffin)

  • Calories: 210
  • Protein: 3g
  • Carbs: 27g
  • Fat: 10g
  • Fiber: 3g

Why This Recipe Works (Quick Science)

The pumpkin puree adds moisture and structure, replacing the need for eggs. Baking powder and baking soda work together to create lift — the acid in the pumpkin activates the soda while the powder gives extra rise. Coconut oil keeps them tender, and gluten-free flour plus the right hydration ensures they don’t turn gummy.

Common Mistakes

  • Overmixing: Makes muffins dense instead of fluffy.
  • Too much pumpkin: Can make muffins heavy and wet. Stick to the measured amount.
  • Skipping the liners: Gluten-free batters stick more than wheat-based ones.
  • Not checking oven temp: An oven that’s too hot can burn the tops before the inside is done.

What to Serve With

  • A hot cup of chai or coffee
  • Fresh fruit salad
  • A drizzle of almond butter
  • A side of vegan yogurt with cinnamon

FAQ

Can I freeze these muffins?
Yes. Cool completely, wrap individually, and freeze for up to 3 months.

Can I make them nut-free?
Swap almond milk for oat milk.

Can I use regular sugar?
Yes, but the flavor will be a bit less caramel-like.

Can I skip the seeds?
Of course — or swap with pumpkin seeds.

Tools You’ll Need

  • Mixing bowls
  • Whisk
  • Measuring cups and spoons
  • Muffin tin
  • Paper muffin liners
  • Spatula

Substitutions and Variations

  • Use pumpkin seeds instead of sunflower seeds
  • Add mini vegan chocolate chips
  • Swap coconut sugar for maple sugar
  • Add a pinch of cloves for extra spice

Make-Ahead Tips

  • Mix dry ingredients and store in an airtight jar for up to a week
  • Measure wet ingredients and refrigerate (except baking soda/powder)
  • Bake and freeze for grab-and-go breakfasts

Instructions

Step 1: Mix Dry Ingredients

In a large bowl, whisk together 1 3/4 cups gluten-free flour, 3/4 cup coconut sugar, 2 teaspoons baking powder, 1/2 teaspoon baking soda, 1 teaspoon cinnamon, 1/2 teaspoon nutmeg, 1/4 teaspoon ginger, and 1/2 teaspoon salt until evenly combined.

Step 2: Mix Wet Ingredients

In a separate bowl, whisk together 1 cup pumpkin puree, 1/3 cup melted coconut oil, 1/2 cup almond milk, and 1 teaspoon vanilla extract until smooth.

Step 3: Combine Wet and Dry

Pour the wet mixture into the dry mixture. Gently fold together with a spatula until just combined — no dry spots but still a bit lumpy.

Step 4: Add Sunflower Seeds

Fold in 3 tablespoons sunflower seeds until evenly distributed through the batter.

Step 5: Fill Muffin Tins

Line a muffin tin with paper liners. Divide batter evenly among 12 cups, filling each about 3/4 full. Sprinkle extra sunflower seeds on top.

Step 6: Bake

Bake at 350°F (175°C) for 22–25 minutes, or until a toothpick comes out clean.

Step 7: Cool and Serve

Let muffins cool in the pan for 5 minutes, then transfer to a wire rack to cool completely before serving.

Gluten-Free Vegan Pumpkin Muffins with Sunflower Seeds

Leftovers and Storage

Store in an airtight container at room temperature for up to 3 days, or in the fridge for up to 5 days. Freeze for longer storage and reheat in the oven.

Conclusion

These gluten-free vegan pumpkin muffins are easy, delicious, and just the thing when you want a cozy bake that’s both wholesome and satisfying. If you make them, drop a comment and let me know how yours turned out — I’d love to hear your twist on them.

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